BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B01LP1|AL425631
(785 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1498 1548 0.0
>3x_Contig1498
Length = 12634
Score = 1548 bits (781), Expect = 0.0
Identities = 784/785 (99%)
Strand = Plus / Plus
Query: 1 tatatacgctgttattgttactcatcagagtctaggactatgagacgtttcttacgcgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6520 tatatacgctgttattgttactcatcagagtctaggactatgagacgtttcttacgcgcg 6579
Query: 61 gagttgttgttgttgttgttgttgttgtcttgactatgagttagacggatggtgtgcggt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6580 gagttgttgttgttgttgttgttgttgtcttgactatgagtgagacggatggtgtgcggt 6639
Query: 121 tctagttcgtcgttactagtactttcgtcaagggagtcaccactcgcgtatccatcgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6640 tctagttcgtcgttactagtactttcgtcaagggagtcaccactcgcgtatccatcgtca 6699
Query: 181 ttatgttcgtagaaatcactgtcgcgagattcgttgtcatcgtcatctgagagggcaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6700 ttatgttcgtagaaatcactgtcgcgagattcgttgtcatcgtcatctgagagggcaaca 6759
Query: 241 gatgctctacggaacttccgttcatctttcaattcttgttcctcttcctcttcttcttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6760 gatgctctacggaacttccgttcatctttcaattcttgttcctcttcctcttcttcttct 6819
Query: 301 tcttcttcctcatccactatgaacgaatctatcgatcctctatcttcctcttcctcctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6820 tcttcttcctcatccactatgaacgaatctatcgatcctctatcttcctcttcctcctct 6879
Query: 361 tcttcttctccatgcataaagttcctaggccgtcttgtgggccatgcctggtccatctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6880 tcttcttctccatgcataaagttcctaggccgtcttgtgggccatgcctggtccatctct 6939
Query: 421 gaactgagactctcatctccctcttcggcttccaaatcgtgcacagtacgtgcactctcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6940 gaactgagactctcatctccctcttcggcttccaaatcgtgcacagtacgtgcactctcg 6999
Query: 481 gctctataattgtccaaatctctctcaacctcttccagttctccgtcagagtactcatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7000 gctctataattgtccaaatctctctcaacctcttccagttctccgtcagagtactcatcc 7059
Query: 541 acatcaacttcgtcgaagttctgtgcacccgcattataattccgtatcgtagcattgcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7060 acatcaacttcgtcgaagttctgtgcacccgcattataattccgtatcgtagcattgcag 7119
Query: 601 ttaggacacacgggaccctcaacttcccattggcaattgctacaccttgctatcccatcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7120 ttaggacacacgggaccctcaacttcccattggcaattgctacaccttgctatcccatcg 7179
Query: 661 tcatcatcgtctatgatggctttggcagtattcttaaacacactgttgaatagcgtttct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7180 tcatcatcgtctatgatggctttggcagtattcttaaacacactgttgaatagcgtttct 7239
Query: 721 tccaacaggtcagacttgtattcagcaacggagcattctctttgtgtgagcagtgatcgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7240 tccaacaggtcagacttgtattcagcaacggagcattctctttgtgtgagcagtgatcgt 7299
Query: 781 acttc 785
|||||
Sbjct: 7300 acttc 7304
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9487
Number of Sequences: 1807
Number of extensions: 9487
Number of successful extensions: 1330
Number of sequences better than 1.0e-20: 1
length of query: 785
length of database: 10,358,551
effective HSP length: 16
effective length of query: 769
effective length of database: 10,329,639
effective search space: 7943492391
effective search space used: 7943492391
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)